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Nope but I guess a workaround would be to make a oneshot workaround-nvidia-gpu.service systemd unit file that runs the command and have the lxc autostart depend on it?
Might be something about PCI resets that running the command triggers π€·ββοΈ
Check lsmod and see if the kernel modules are loaded. Nvidia smi is probably loading them for you on first run.
Most of the setup guides I've seen, have a udev rule that runs nvidia-modprobe. Here's one I just found.